Runtime: Fix bugs in Linux target.

- next occurence absolute time computation failing on 32-bit because of casting
- PLC thread was started before period was set, potentially passing uninitialized timespec to clock_nanosleep()

          <xsd:attribute name="Command" type="xsd:string" use="optional" default="make -C %(buildpath)s all BEREMIZSRC=%(src)s BEREMIZCFLAGS=%(cflags)s MD5=%(md5)s USE_BEREMIZ=1 FROM_BEREMIZ=1"/>